de.charite.compbio:jannovar-htsjdk

jannovar-htsjdk is the module for bridging between Jannovar and HTSJDK

Homepage POM file JAR file Javadoc

'de.charite.compbio:jannovar-htsjdk:0.15'

<dependency>
	<groupId>de.charite.compbio</groupId>
	<artifactId>jannovar-htsjdk</artifactId>
	<version>0.15</version>
</dependency>

<dependency org="de.charite.compbio" name="jannovar-htsjdk" rev="0.15"/>

"de.charite.compbio", "jannovar-htsjdk", "0.15"

Dependencies

Compile dependencies

com.github.samtools » htsjdk » 1.138
com.google.guava » guava » 18.0
commons-io » commons-io » 2.4
commons-net » commons-net » 3.3
de.charite.compbio » jannovar-core » 0.15
de.charite.compbio » jannovar-hgvs » 0.15
org.apache.logging.log4j » log4j-api » 2.1
org.apache.logging.log4j » log4j-core » 2.1
org.slf4j » slf4j-api » 1.7.7

Test dependencies

junit » junit » 4.11
org.apache.logging.log4j » log4j-slf4j-impl » 2.1